Package: dreval 0.1.5

dreval: Evaluate Reduced Dimension Representations

Evaluate and compare multiple reduced dimension representations, based on how well they retain structure from the original data set.

Authors:Charlotte Soneson [aut, cre]

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dreval.pdf |dreval.html✨
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NEWS

# Install 'dreval' in R:
install.packages('dreval', repos = c('https://csoneson.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/csoneson/dreval/issues

Datasets:
  • pbmc3ksub - Expression profiles for 2,700 PBMCs

On CRAN:

dimensionreductionprincipalcomponentvisualization

4.02 score 7 stars 2 scripts 2 exports 68 dependencies

Last updated 4 months agofrom:5c2cb03c24. Checks:OK: 3 WARNING: 1 NOTE: 3. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 14 2024
R-4.5-winNOTENov 14 2024
R-4.5-linuxWARNINGNov 14 2024
R-4.4-winNOTENov 14 2024
R-4.4-macNOTENov 14 2024
R-4.3-winOKNov 14 2024
R-4.3-macOKNov 14 2024

Exports:drevalplotRankSummary

Dependencies:abindaskpassBiobaseBiocGenericscliclustercolorspacecoRankingcpp11crayoncurlDelayedArraydplyrfansifarvergenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablehttriotoolsIRangesisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigpurrrR6RColorBrewerRcpprlangS4ArraysS4VectorsscalesSingleCellExperimentSparseArraysparsesvdstringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrwordspaceXVectorzlibbioc

dreval

Charlotte Soneson

Rendered fromdreval.Rmdusingknitr::rmarkdownon Nov 14 2024.

Last update: 2019-10-11
Started: 2019-09-04