Package: dreval 0.1.5

dreval: Evaluate Reduced Dimension Representations

Evaluate and compare multiple reduced dimension representations, based on how well they retain structure from the original data set.

Authors:Charlotte Soneson [aut, cre]

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dreval.pdf |dreval.html✨
dreval/json (API)
NEWS

# Install 'dreval' in R:
install.packages('dreval', repos = c('https://csoneson.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/csoneson/dreval/issues

Datasets:
  • pbmc3ksub - Expression profiles for 2,700 PBMCs

On CRAN:

Conda:

dimensionreductionprincipalcomponentvisualization

4.02 score 7 stars 2 scripts 2 exports 67 dependencies

Last updated 3 months agofrom:9ff8b385ed. Checks:3 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 21 2025
R-4.5-winNOTEMar 21 2025
R-4.5-macNOTEMar 21 2025
R-4.5-linuxNOTEMar 21 2025
R-4.4-winNOTEMar 21 2025
R-4.4-macNOTEMar 21 2025
R-4.4-linuxNOTEMar 21 2025
R-4.3-winOKMar 21 2025
R-4.3-macOKMar 21 2025

Exports:drevalplotRankSummary

Dependencies:abindaskpassBiobaseBiocGenericscliclustercolorspacecoRankingcpp11crayoncurlDelayedArraydplyrfansifarvergenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablehttriotoolsIRangesisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigpurrrR6RColorBrewerRcpprlangS4ArraysS4VectorsscalesSingleCellExperimentSparseArraysparsesvdstringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrwordspaceXVector

dreval

Charlotte Soneson

Rendered fromdreval.Rmdusingknitr::rmarkdownon Mar 21 2025.

Last update: 2019-10-11
Started: 2019-09-04